Biochemical Engineering Fundamentals, Part 1 - Bailey J., Ollis D. 1989

The Chemical Basis of Life
Amino Acids and Proteins
Quaternary Structure and Regulation of Biological Processes

Proteins can be composed of several polypeptide chains (subunits); Hemoglobin is perhaps the most widely known of these. The quaternary Structure of a protein refers to the way its subunits are arranged. As shown by the data in Table 2.10, many proteins, especially Enzymes (whose names typically end with the suffix -ase), are oligomers and must therefore possess a characteristic quaternary structure. Quaternary structure is believed to be stabilized by the same forces and bonds as tertiary structure. In some cases, such as Insulin, Disulfide Bonds participate in The formation of quaternary structures; however, in most of the Examples listed in Table 2.10, the subunits are held together in the oligomeric protein molecule by weaker interactions. Many Oligomeric Proteins are known to be capable of self-assembly; for example, separated α- and β-chains of hemoglobin in solution rapidly associate to form intact hemoglobin molecules. This property of proteins is highly illustrative, as it demonstrates (at least in some cases) the governing role of the one-dimensional biochemical DNA code, which determines not only the Introduction/19.html">Primary Structure of Proteins but also, through it, all higher levels of Cell/13.html">Protein Structure and, consequently, their specific biological Functions.

Current evidence indicates that the assembly of certain protein molecules from multiple subunits serves at least two important biological functions: first, it regulates the catalytic activity of enzymes, and second, it provides extensive opportunities for constructing related but non-identical molecules from the same set of subunits. This latter function is illustrated by proteins known as Isoenzymes or isozymes. Isoenzymes are distinct molecular forms of an enzyme that catalyze the same reaction within organisms of a single species. The existence of isoenzymes might seem redundant at first glance; however, the availability of parallel yet distinct catalytic processes is actually an essential element of several biochemical regulatory systems (Chaps. 3 and 5). Some isoenzymes are known to be oligomeric proteins; a case has been described of isoenzymes composed of five subunits of only two types. Such a design can be considered highly efficient and advantageous, as it enables the synthesis of five different proteins from just two polypeptide chains.

Class="center">Table 2.10. Characteristics of Some oligomeric proteins*

Protein

Molecular weight

Number of polypeptide chains

Number of disulfide bonds

Insulin

5798

1+1

3

Ribonuclease

13 683

1

4

Lysozyme

14 400

1

5

Myoglobin

17 000

1

0

Papain

20 900

1

3

Trypsin

23 800

1

6

Chymotrypsin

24 500

3

5

Carboxypeptidase

34 300

1

0

Hexokinase

45 000

2

0

Taka-amylase

52 000

1

4

Bovine serum albumin

66 500

1

17

Yeast enolase

67 000

2

0

Hemoglobin

68 000

2+2

0

Liver Alcohol dehydrogenase

78 000

2

0

Alkaline phosphatase

80 000

2

4

Hemerythrin

107 000

8

0

Glyceraldehyde phosphate dehydrogenase

140 000

4

0

Lactate dehydrogenase

140 000

4

0

γ-Globulin

140 000

2+2

25

Yeast alcohol dehydrogenase

150 000

4

0

Tryptophan synthetase

159 000

2+2


Aldolase

160 000

4(?)

0

Phosphorylase b

185 000

2


Salmonella Threonine deaminase

194 000

4


Fumarase

200 000

4

0

Tryptophanase

220 000

8

4

Formyltetrahydrofolate synthetase

230 000

4


Aspartate transcarbamoylase

310 000

4+4

0

Glutamate dehydrogenase

316 000

6

0

Fibrinogen

330 000

2+2+2


Phosphorylase a

370 000

4


Myosin

500 000

2+3

0

β-Galactosidase

540 000

4


Ribulose diphosphate carboxylase

557 000

24


a Reproduced with permission from: Loewy, A., Siekevitz, P., Cell Structure and function. — Moscow: Mir, 1971.



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